If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ), 'gf_id' => 'HOM05D000549', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000549' ), 'data_identifier' => 'HOM05D000549', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000549', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '996', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p08980' => 'bna', 'A03p01310' => 'bna', 'A03p34920' => 'bna', 'A03p41570' => 'bna', 'A03p49680' => 'bna', 'A03p58590' => 'bna', 'A03p58640' => 'bna', 'A04p15710' => 'bna', 'A05p34190' => 'bna', 'A05p41270' => 'bna', 'A06p12830' => 'bna', 'A07p20560' => 'bna', 'A08p19890' => 'bna', 'A09p20250' => 'bna', 'Aa31LG10G5900' => 'aar', 'Aa31LG2G12980' => 'aar', 'Aa31LG2G21340' => 'aar', 'Aa31LG5G17440' => 'aar', 'Aa31LG8G2470' => 'aar', 'Aa31LG9G13380' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2146' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5010' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.5361' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2905' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.574' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.1747' => 'aag', 'Actinidia00006' => 'ach', 'Actinidia07407' => 'ach', 'Actinidia07408' => 'ach', 'Actinidia07409' => 'ach', 'Actinidia08039' => 'ach', 'Actinidia08298' => 'ach', 'Actinidia09693' => 'ach', 'Actinidia10849' => 'ach', 'Actinidia13462' => 'ach', 'Actinidia21222' => 'ach', 'Actinidia22136' => 'ach', 'Actinidia24299' => 'ach', 'Actinidia25134' => 'ach', 'Actinidia25188' => 'ach', 'Actinidia27683' => 'ach', 'Actinidia30611' => 'ach', 'Actinidia31548' => 'ach', 'Actinidia33283' => 'ach', 'Actinidia33284' => 'ach', 'Ah.03g135820' => 'amhyb', 'Ah.04g164750' => 'amhyb', 'Ah.09g230970' => 'amhyb', 'Ah.12g054460' => 'amhyb', 'Ah.13g074850' => 'amhyb', 'Ah.14g082330' => 'amhyb', 'Ah.14g082340' => 'amhyb', 'AL1058U10010' => 'aly', 'AL3G17980' => 'aly', 'AL3G27680' => 'aly', 'AL7G23450' => 'aly', 'AL7G37850' => 'aly', 'AL7G38880' => 'aly', 'AL8G17180' => 'aly', 'Aqoxy1G02369' => 'aox', 'Aqoxy3G02723' => 'aox', 'Aqoxy5G00773' => 'aox', 'Aqoxy5G02694' => 'aox', 'Aqoxy5G03240' => 'aox', 'Aqoxy7G01586' => 'aox', 'Aqoxy7G01587' => 'aox', 'arahy.Tifrunner.gnm1.ann1.3CX1ZP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5JEW3L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6DJZ7H' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.88J559' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9CR681' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9G9LXM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BXA2NV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9R4QS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KD7CXP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LK9N17' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LX1BG3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M7AF0M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MI1RE4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NHM7H0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PE0XQG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q3474R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QP3SM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T0QXQZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T12W0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U9FTP0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V8INB7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z6CDUJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZDAR2H' => 'arhy', 'AT3G06860' => 'ath', 'AT3G15290' => 'ath', 'AT4G16210' => 'ath', 'AT4G16800' => 'ath', 'AT4G29010' => 'ath', 'AT5G43280' => 'ath', 'ATR0057G066' => 'atr', 'ATR0150G011' => 'atr', 'ATR0315G037' => 'atr', 'ATR0315G108' => 'atr', 'ATR0582G102' => 'atr', 'ATR0693G117' => 'atr', 'ATR0796G259' => 'atr', 'Atru.chr11.2394' => 'acertr', 'Atru.chr2.2437' => 'acertr', 'Atru.chr4.3030' => 'acertr', 'Atru.chr6.1994' => 'acertr', 'Atru.chr7.1369' => 'acertr', 'Atru.chr9.1244' => 'acertr', 'AUR62005679' => 'cqu', 'AUR62007136' => 'cqu', 'AUR62010951' => 'cqu', 'AUR62010958' => 'cqu', 'AUR62016220' => 'cqu', 'AUR62018092' => 'cqu', 'AUR62018877' => 'cqu', 'AUR62019444' => 'cqu', 'AUR62021461' => 'cqu', 'AUR62021468' => 'cqu', 'AUR62028876' => 'cqu', 'AUR62032014' => 'cqu', 'AUR62039187' => 'cqu', 'AUR62039268' => 'cqu', 'BcaB03g12590' => 'bca', 'BcaB06g29553' => 'bca', 'BcaB06g29554' => 'bca', 'BcaB07g31019' => 'bca', 'BcaC04g21935' => 'bca', 'BcaC04g21936' => 'bca', 'BcaC05g28998' => 'bca', 'BcaC05g28999' => 'bca', 'BcaC05g30563' => 'bca', 'BcaC06g32997' => 'bca', 'BcaC06g33455' => 'bca', 'BcaC07g38022' => 'bca', 'BcaC07g38363' => 'bca', 'BcaC09g47925' => 'bca', 'BcaC09g51677' => 'bca', 'BcaNung00444' => 'bca', 'BcaNung02891' => 'bca', 'BNapus_Darmor_BZH_scaffold_117p00140' => 'bna', 'BolC1t01015H' => 'bol', 'BolC1t01937H' => 'bol', 'BolC1t05581H' => 'bol', 'BolC3t16520H' => 'bol', 'BolC3t19667H' => 'bol', 'BolC5t33880H' => 'bol', 'BolC5t34703H' => 'bol', 'BolC7t45300H' => 'bol', 'BolC7t46136H' => 'bol', 'BolC8t48777H' => 'bol', 'BolC8t48780H' => 'bol', 'BolC9t55470H' => 'bol', 'BraA01t00845Z' => 'bra', 'BraA01t04409Z' => 'bra', 'BraA03t12672Z' => 'bra', 'BraA03t14067Z' => 'bra', 'BraA03t14919Z' => 'bra', 'BraA03t14924Z' => 'bra', 'BraA04t18584Z' => 'bra', 'BraA05t21578Z' => 'bra', 'BraA05t22239Z' => 'bra', 'BraA05t22850Z' => 'bra', 'BraA08t33946Z' => 'bra', 'BraA09t37213Z' => 'bra', 'BraA09t37638Z' => 'bra', 'C01p10520' => 'bna', 'C02p08830' => 'bna', 'C03p42500' => 'bna', 'C05p51940' => 'bna', 'C05p60490' => 'bna', 'C07p20300' => 'bna', 'C07p47750' => 'bna', 'C07p56580' => 'bna', 'C08p11110' => 'bna', 'C09p25670' => 'bna', 'CAN.G1280.7' => 'can', 'CAN.G135.77' => 'can', 'CAN.G158.35' => 'can', 'CAN.G162.46' => 'can', 'CAN.G176.20' => 'can', 'CAN.G1774.13' => 'can', 'CAN.G18.17' => 'can', 'CAN.G1856.5' => 'can', 'CAN.G1989.3' => 'can', 'CAN.G206.147' => 'can', 'CAN.G21.38' => 'can', 'CAN.G21.40' => 'can', 'CAN.G235.5' => 'can', 'CAN.G244.4' => 'can', 'CAN.G249.1' => 'can', 'CAN.G254.3' => 'can', 'CAN.G254.5' => 'can', 'CAN.G29.5' => 'can', 'CAN.G372.5' => 'can', 'CAN.G376.14' => 'can', 'CAN.G395.1' => 'can', 'CAN.G395.3' => 'can', 'CAN.G421.10' => 'can', 'CAN.G423.32' => 'can', 'CAN.G484.46' => 'can', 'CAN.G84.16' => 'can', 'CAN.G885.1' => 'can', 'CAN.G885.2' => 'can', 'CANSAT01G0648' => 'cansat', 'CANSAT01G1614' => 'cansat', 'CANSAT02G0008' => 'cansat', 'CANSAT21G0274' => 'cansat', 'CANSAT56G1548' => 'cansat', 'CANSAT56G3843' => 'cansat', 'CANSAT78G1289' => 'cansat', 'CANSAT78G1351' => 'cansat', 'CARHR081470' => 'chi', 'CARHR090270' => 'chi', 'CARHR180490' => 'chi', 'CARHR222590' => 'chi', 'CARHR223420' => 'chi', 'CARHR236740' => 'chi', 'Carub.0003s0639' => 'cru', 'Carub.0003s1494' => 'cru', 'Carub.0007s1163' => 'cru', 'Carub.0007s2456' => 'cru', 'Carub.0007s2531' => 'cru', 'Carub.0008s0541' => 'cru', 'Ca_01919_v3' => 'car', 'Ca_11430_v3' => 'car', 'Ca_20229_v3' => 'car', 'Ca_21437_v3' => 'car', 'Ca_21484_v3' => 'car', 'Ca_21986_v3' => 'car', 'Ca_21999_v3' => 'car', 'Ca_23049_v3' => 'car', 'Ca_28699_v3' => 'car', 'Ca_29860_v3' => 'car', 'CBR_g19869' => 'cbr', 'CBR_g50345' => 'cbr', 'CBR_g58690' => 'cbr', 'CBR_g61517' => 'cbr', 'Cc03_g00730' => 'ccan', 'Cc03_g01660' => 'ccan', 'Cc05_g11870' => 'ccan', 'Cc06_g09910' => 'ccan', 'Cc08_g11870' => 'ccan', 'Cc11_g17400' => 'ccan', 'CDE05G0550' => 'cde', 'CDE06G0094' => 'cde', 'CDE06G1267' => 'cde', 'CDE08G0406' => 'cde', 'CDE11G0311' => 'cde', 'Cfa002619' => 'cfa', 'Cfa003237' => 'cfa', 'Cfa009408' => 'cfa', 'Cfa014748' => 'cfa', 'Cfa015316' => 'cfa', 'Cfa015410' => 'cfa', 'Cfa015411' => 'cfa', 'Cfa016414' => 'cfa', 'Cfa018390' => 'cfa', 'Cfa019740' => 'cfa', 'Cfa025214' => 'cfa', 'Cfa025899' => 'cfa', 'Cfa026035' => 'cfa', 'Cfa026286' => 'cfa', 'Cfa026361' => 'cfa', 'Cfa026370' => 'cfa', 'Ciclev10004429m.g' => 'ccl', 'Ciclev10005645m.g' => 'ccl', 'Ciclev10007590m.g' => 'ccl', 'Ciclev10009049m.g' => 'ccl', 'Ciclev10019636m.g' => 'ccl', 'Ciclev10032364m.g' => 'ccl', 'CiPaw.01G137600' => 'cil', 'CiPaw.01G146400' => 'cil', 'CiPaw.01G146500' => 'cil', 'CiPaw.02G080800' => 'cil', 'CiPaw.02G080900' => 'cil', 'CiPaw.03G229300' => 'cil', 'CiPaw.04G162800' => 'cil', 'CiPaw.05G104900' => 'cil', 'CiPaw.06G106600' => 'cil', 'CiPaw.11G171000' => 'cil', 'CiPaw.12G048500' => 'cil', 'ClCG05G009290' => 'cla', 'ClCG06G004550' => 'cla', 'ClCG06G005030' => 'cla', 'ClCG06G005090' => 'cla', 'ClCG07G015310' => 'cla', 'ClCG10G002420' => 'cla', 'ClCG11G002380' => 'cla', 'COL.COLO4_04778' => 'col', 'COL.COLO4_10023' => 'col', 'COL.COLO4_13832' => 'col', 'COL.COLO4_17381' => 'col', 'COL.COLO4_18680' => 'col', 'COL.COLO4_34605' => 'col', 'COL.COLO4_34830' => 'col', 'COL.COLO4_34831' => 'col', 'COL.COLO4_34832' => 'col', 'Cpa.g.c38049' => 'cpa', 'Cpa.g.sc16.196' => 'cpa', 'Cpa.g.sc1973.1' => 'cpa', 'Cpa.g.sc80.84' => 'cpa', 'Cpa.g.sc846.2' => 'cpa', 'Cpa.g.sc89.36' => 'cpa', 'Cpa.g.sc99.61' => 'cpa', 'Cre02.g091850' => 'cre', 'Cre03.g190850' => 'cre', 'Cre10.g463150' => 'cre', 'Cre12.g534350' => 'cre', 'Cre16.g695050' => 'cre', 'CsaV3_2G002170' => 'csa', 'CsaV3_3G002440' => 'csa', 'CsaV3_3G019500' => 'csa', 'CsaV3_4G002910' => 'csa', 'CsaV3_6G022310' => 'csa', 'CsaV3_6G023910' => 'csa', 'CsaV3_6G023960' => 'csa', 'CsaV3_6G024060' => 'csa', 'CsaV3_6G024070' => 'csa', 'CsaV3_6G024110' => 'csa', 'CsaV3_6G025240' => 'csa', 'CsaV3_6G025310' => 'csa', 'CsaV3_6G028580' => 'csa', 'CSS0000377' => 'camsi', 'CSS0001104' => 'camsi', 'CSS0001507' => 'camsi', 'CSS0002790' => 'camsi', 'CSS0011014' => 'camsi', 'CSS0012700' => 'camsi', 'CSS0017169' => 'camsi', 'CSS0020016' => 'camsi', 'CSS0022595' => 'camsi', 'CSS0026454' => 'camsi', 'CSS0026955' => 'camsi', 'CSS0027356' => 'camsi', 'CSS0028924' => 'camsi', 'CSS0030990' => 'camsi', 'CSS0042587' => 'camsi', 'CSS0046508' => 'camsi', 'DCAR_002848' => 'dca', 'DCAR_004604' => 'dca', 'DCAR_013114' => 'dca', 'DCAR_027059' => 'dca', 'DCAR_028698' => 'dca', 'DCAR_030465' => 'dca', 'DCAR_030511' => 'dca', 'DCAR_031208' => 'dca', 'Dinv07034' => 'din', 'Dinv14928' => 'din', 'Dinv15160' => 'din', 'Dinv20187' => 'din', 'Dinv29738' => 'din', 'Dinv33064' => 'din', 'Dinv36654' => 'din', 'Dinv39189' => 'din', 'Dinv41622' => 'din', 'Duzib052G0125' => 'dzi', 'Duzib068G1439' => 'dzi', 'Duzib116G0193' => 'dzi', 'Duzib168G0744' => 'dzi', 'Duzib168G0748' => 'dzi', 'Duzib187G0435' => 'dzi', 'Duzib205G0373' => 'dzi', 'Duzib211G0250' => 'dzi', 'Duzib212G0370' => 'dzi', 'Duzib248G1635' => 'dzi', 'Duzib268G0752' => 'dzi', 'ECA232G1256' => 'eca', 'ECA234G0820' => 'eca', 'ECA234G4038' => 'eca', 'ECA240G2933' => 'eca', 'ECA240G3770' => 'eca', 'ECA240G4209' => 'eca', 'EL10Ac3g05521' => 'bvu', 'EL10Ac3g06630' => 'bvu', 'EL10Ac4g08211' => 'bvu', 'EL10Ac5g12312' => 'bvu', 'EL10Ac6g13564' => 'bvu', 'EL10Ac8g18444' => 'bvu', 'Eucgr.A00382' => 'egr', 'Eucgr.B01603' => 'egr', 'Eucgr.C01261' => 'egr', 'Eucgr.C01265' => 'egr', 'Eucgr.D02114' => 'egr', 'Eucgr.F03304' => 'egr', 'Eucgr.H03943' => 'egr', 'Eucgr.H03948' => 'egr', 'Eucgr.H04584' => 'egr', 'Eucgr.H04586' => 'egr', 'Eucgr.H04588' => 'egr', 'Eucgr.H04593' => 'egr', 'Eucgr.H04595' => 'egr', 'Eucgr.H04597' => 'egr', 'Eucgr.K02175' => 'egr', 'Eucgr.K02180' => 'egr', 'FAN07G1291' => 'fan', 'FAN07G2599' => 'fan', 'FAN08G1945' => 'fan', 'FAN11G2623' => 'fan', 'FAN12G0009' => 'fan', 'FAN12G2279' => 'fan', 'FAN12G3084' => 'fan', 'FAN12G3817' => 'fan', 'FAN17G0880' => 'fan', 'FAN18G3846' => 'fan', 'FAN19G1285' => 'fan', 'FAN23G0873' => 'fan', 'FAN25G1998' => 'fan', 'FAN26G3066' => 'fan', 'FAN28G3007' => 'fan', 'FvH4_1g04350' => 'fve', 'FvH4_3g19690' => 'fve', 'FvH4_4g18500' => 'fve', 'FvH4_4g19880' => 'fve', 'FvH4_4g23150' => 'fve', 'FvH4_5g19890' => 'fve', 'Glyma.01G088700' => 'gma', 'Glyma.03G119400' => 'gma', 'Glyma.05G063900' => 'gma', 'Glyma.06G254700' => 'gma', 'Glyma.07G085200' => 'gma', 'Glyma.07G239200' => 'gma', 'Glyma.07G246300' => 'gma', 'Glyma.07G246400' => 'gma', 'Glyma.09G191700' => 'gma', 'Glyma.17G027600' => 'gma', 'Glyma.17G027700' => 'gma', 'Glyma.17G034100' => 'gma', 'Glyma.17G145600' => 'gma', 'Glyma.19G123700' => 'gma', 'Glyma.20G051850' => 'gma', 'Gohir.A01G034800' => 'ghi', 'Gohir.A01G062201' => 'ghi', 'Gohir.A02G076000' => 'ghi', 'Gohir.A06G064100' => 'ghi', 'Gohir.A07G005250' => 'ghi', 'Gohir.A07G107866' => 'ghi', 'Gohir.A08G241700' => 'ghi', 'Gohir.A09G062900' => 'ghi', 'Gohir.A10G165600' => 'ghi', 'Gohir.A12G214000' => 'ghi', 'Gohir.A13G153400' => 'ghi', 'Gohir.D01G023550' => 'ghi', 'Gohir.D01G048800' => 'ghi', 'Gohir.D02G083200' => 'ghi', 'Gohir.D06G062700' => 'ghi', 'Gohir.D07G006800' => 'ghi', 'Gohir.D07G165678' => 'ghi', 'Gohir.D08G262500' => 'ghi', 'Gohir.D09G061900' => 'ghi', 'Gohir.D10G171700' => 'ghi', 'Gohir.D11G212033' => 'ghi', 'Gohir.D12G092450' => 'ghi', 'Gohir.D12G133166' => 'ghi', 'Gohir.D12G133232' => 'ghi', 'Gohir.D12G216600' => 'ghi', 'Gohir.D13G158000' => 'ghi', 'Gorai.001G006400' => 'gra', 'Gorai.002G030500' => 'gra', 'Gorai.002G068600' => 'gra', 'Gorai.003G067500' => 'gra', 'Gorai.004G280500' => 'gra', 'Gorai.005G093700' => 'gra', 'Gorai.006G076600' => 'gra', 'Gorai.008G144100' => 'gra', 'Gorai.008G232000' => 'gra', 'Gorai.008G232200' => 'gra', 'Gorai.009G321300' => 'gra', 'Gorai.010G073100' => 'gra', 'Gorai.011G191800' => 'gra', 'Gorai.013G178700' => 'gra', 'Gorai.N005500' => 'gra', 'GSVIVG01000939001' => 'vvi', 'GSVIVG01004793001' => 'vvi', 'GSVIVG01014304001' => 'vvi', 'GSVIVG01015364001' => 'vvi', 'GSVIVG01034981001' => 'vvi', 'GSVIVG01035128001' => 'vvi', 'HanXRQChr01g0017631' => 'han', 'HanXRQChr03g0061501' => 'han', 'HanXRQChr03g0089421' => 'han', 'HanXRQChr03g0089451' => 'han', 'HanXRQChr03g0089881' => 'han', 'HanXRQChr05g0148171' => 'han', 'HanXRQChr06g0184171' => 'han', 'HanXRQChr10g0302691' => 'han', 'HanXRQChr10g0318651' => 'han', 'HanXRQChr11g0353461' => 'han', 'HanXRQChr12g0355031' => 'han', 'HanXRQChr13g0387281' => 'han', 'HanXRQChr13g0419031' => 'han', 'HanXRQChr13g0420031' => 'han', 'HanXRQChr14g0426961' => 'han', 'HanXRQChr17g0557371' => 'han', 'HanXRQChr17g0567711' => 'han', 'Haze_01178' => 'cav', 'Haze_06693' => 'cav', 'Haze_07961' => 'cav', 'Haze_09443' => 'cav', 'Haze_12466' => 'cav', 'Haze_25769' => 'cav', 'Haze_26664' => 'cav', 'Hma1.2p1_0042F.1_g025740' => 'hma', 'Hma1.2p1_0078F.1_g040410' => 'hma', 'Hma1.2p1_0078F.1_g040590' => 'hma', 'Hma1.2p1_0387F.1_g141990' => 'hma', 'Hma1.2p1_0387F.1_g142000' => 'hma', 'Hma1.2p1_0821F.1_g224190' => 'hma', 'Hma1.2p1_1151F.1_g261970' => 'hma', 'Hma1.2p1_1151F.1_g261980' => 'hma', 'Hma1.2p1_1436F.1_g283170' => 'hma', 'Hma1.2p1_1436F.1_g283180' => 'hma', 'Hma1.2p1_1436F.1_g283200' => 'hma', 'Hma1.2p1_1482F.1_g286240' => 'hma', 'HPP92_000335' => 'vpl', 'HPP92_000518' => 'vpl', 'HPP92_002098' => 'vpl', 'HPP92_008804' => 'vpl', 'HPP92_008931' => 'vpl', 'HPP92_015984' => 'vpl', 'HPP92_015985' => 'vpl', 'HPP92_015987' => 'vpl', 'HPP92_021678' => 'vpl', 'HPP92_026863' => 'vpl', 'HPP92_026864' => 'vpl', 'HPP92_028062' => 'vpl', 'Hund06115' => 'sun', 'Hund11980' => 'sun', 'Hund14509' => 'sun', 'Hund20538' => 'sun', 'Hund22858' => 'sun', 'Hund24884' => 'sun', 'Hund26223' => 'sun', 'Hund28769' => 'sun', 'Hund28770' => 'sun', 'Lalb_Chr00c24g0407461' => 'lal', 'Lalb_Chr00c54g0413641' => 'lal', 'Lalb_Chr03g0030701' => 'lal', 'Lalb_Chr05g0221011' => 'lal', 'Lalb_Chr07g0182061' => 'lal', 'Lalb_Chr13g0298481' => 'lal', 'Lalb_Chr13g0298491' => 'lal', 'Lalb_Chr13g0303531' => 'lal', 'Lalb_Chr14g0371601' => 'lal', 'Lalb_Chr18g0051561' => 'lal', 'Lalb_Chr20g0114641' => 'lal', 'Lalb_Chr21g0307751' => 'lal', 'Lalb_Chr23g0272231' => 'lal', 'Lj2C1197G9' => 'lonja', 'Lj2C226T17' => 'lonja', 'Lj2g0006346' => 'lja', 'Lj3A822T36' => 'lonja', 'Lj3A832T19' => 'lonja', 'Lj3g0011104' => 'lja', 'Lj4g0005647' => 'lja', 'Lj4g0011617' => 'lja', 'Lj4g0025343' => 'lja', 'Lj6C833T8' => 'lonja', 'Lj6g0000515' => 'lja', 'Lj7A654G24' => 'lonja', 'Lj7C654G5' => 'lonja', 'Lj8A154T80' => 'lonja', 'LjContig00470g0027621' => 'lja', 'Lsat_1_v5_gn_1_25980' => 'lsa', 'Lsat_1_v5_gn_1_41500' => 'lsa', 'Lsat_1_v5_gn_1_85560' => 'lsa', 'Lsat_1_v5_gn_2_77700' => 'lsa', 'Lsat_1_v5_gn_4_103321' => 'lsa', 'Lsat_1_v5_gn_4_1980' => 'lsa', 'Lsat_1_v5_gn_4_61320' => 'lsa', 'Lsat_1_v5_gn_5_103001' => 'lsa', 'Lsat_1_v5_gn_5_128041' => 'lsa', 'Lsat_1_v5_gn_5_190860' => 'lsa', 'Lsat_1_v5_gn_5_58760' => 'lsa', 'Lsat_1_v5_gn_5_60621' => 'lsa', 'Lsat_1_v5_gn_5_82980' => 'lsa', 'Lsat_1_v5_gn_6_93941' => 'lsa', 'Lsat_1_v5_gn_6_96420' => 'lsa', 'Lsat_1_v5_gn_7_22341' => 'lsa', 'Lsat_1_v5_gn_7_22400' => 'lsa', 'Lsat_1_v5_gn_7_42121' => 'lsa', 'Lsat_1_v5_gn_7_88340' => 'lsa', 'Lsat_1_v5_gn_7_97701' => 'lsa', 'Lsat_1_v5_gn_8_77480' => 'lsa', 'Lsat_1_v5_gn_9_19620' => 'lsa', 'Lsat_1_v5_gn_9_99740' => 'lsa', 'Manes.01G085900' => 'mes', 'Manes.03G022900' => 'mes', 'Manes.03G107000' => 'mes', 'Manes.03G197400' => 'mes', 'Manes.10G028000' => 'mes', 'Manes.12G006600' => 'mes', 'Manes.16G113900' => 'mes', 'Mapoly0027s0009' => 'mpo', 'Mapoly0034s0004' => 'mpo', 'Mapoly0045s0112' => 'mpo', 'Mapoly0058s0041' => 'mpo', 'Mapoly0065s0040' => 'mpo', 'Mapoly0073s0018' => 'mpo', 'Mapoly0152s0018' => 'mpo', 'MBI01_g30746_MAGBIO' => 'mbi', 'MBI04_g19178_MAGBIO' => 'mbi', 'MBI11_g29215_MAGBIO' => 'mbi', 'MBI11_g29216_MAGBIO' => 'mbi', 'MBI18_g24884_MAGBIO' => 'mbi', 'MBI19_g03253_MAGBIO' => 'mbi', 'MBI19_g34787_MAGBIO' => 'mbi', 'MCO10G253' => 'mco', 'MCO11G571' => 'mco', 'MCO15G175' => 'mco', 'MD02G1043100' => 'mdo', 'MD02G1043200' => 'mdo', 'MD02G1043300' => 'mdo', 'MD04G1057400' => 'mdo', 'MD06G1051000' => 'mdo', 'MD11G1251600' => 'mdo', 'MD13G1124500' => 'mdo', 'MD13G1166700' => 'mdo', 'MD15G1181900' => 'mdo', 'MD16G1125500' => 'mdo', 'MD16G1125600' => 'mdo', 'MD16G1152800' => 'mdo', 'MD16G1166400' => 'mdo', 'Medtr0837s0020' => 'mtr', 'Medtr2027s0010' => 'mtr', 'Medtr2g039260' => 'mtr', 'Medtr2g436300' => 'mtr', 'Medtr3g085700' => 'mtr', 'Medtr4g100350' => 'mtr', 'Medtr4g120130' => 'mtr', 'Medtr4g122220' => 'mtr', 'Medtr6g087670' => 'mtr', 'Medtr8g058775' => 'mtr', 'Medtr8g061230' => 'mtr', 'MELO3C004565.2' => 'cme', 'MELO3C013913.2' => 'cme', 'MELO3C017752.2' => 'cme', 'MELO3C019405.2' => 'cme', 'MELO3C021265.2' => 'cme', 'MELO3C021318.2' => 'cme', 'MELO3C021326.2' => 'cme', 'Migut.C00200' => 'egut', 'Migut.E00002' => 'egut', 'Migut.G00070' => 'egut', 'Migut.J01144' => 'egut', 'Migut.K00503' => 'egut', 'Migut.M00789' => 'egut', 'Migut.N00084' => 'egut', 'Migut.N01512' => 'egut', 'MSTRG.10154' => 'ama', 'MSTRG.10626' => 'ama', 'MSTRG.12608' => 'ama', 'MSTRG.2466' => 'ama', 'MSTRG.24797' => 'ama', 'MSTRG.6826' => 'ama', 'MSTRG.950' => 'ama', 'Nitab4.5_0000097g0050' => 'nta', 'Nitab4.5_0000177g0080' => 'nta', 'Nitab4.5_0000340g0140' => 'nta', 'Nitab4.5_0000513g0100' => 'nta', 'Nitab4.5_0000513g0160' => 'nta', 'Nitab4.5_0000570g0260' => 'nta', 'Nitab4.5_0000895g0010' => 'nta', 'Nitab4.5_0000931g0040' => 'nta', 'Nitab4.5_0001148g0050' => 'nta', 'Nitab4.5_0001241g0110' => 'nta', 'Nitab4.5_0002628g0010' => 'nta', 'Nitab4.5_0003733g0010' => 'nta', 'Nitab4.5_0004391g0080' => 'nta', 'Nitab4.5_0006805g0030' => 'nta', 'Nitab4.5_0007626g0030' => 'nta', 'Nitab4.5_0008063g0010' => 'nta', 'Nitab4.5_0008063g0020' => 'nta', 'Nitab4.5_0009301g0030' => 'nta', 'Nitab4.5_0013979g0010' => 'nta', 'Nn1g04151' => 'nnu', 'Nn2g11680' => 'nnu', 'Nn3g17941' => 'nnu', 'Nn3g18092' => 'nnu', 'Nn3g18093' => 'nnu', 'Nn3g18094' => 'nnu', 'Nn3g21524' => 'nnu', 'Nn5g27151' => 'nnu', 'Nn5g27421' => 'nnu', 'Nn6g33826' => 'nnu', 'Oeu001110.1' => 'oeu', 'Oeu002246.1' => 'oeu', 'Oeu013424.1' => 'oeu', 'Oeu013425.1' => 'oeu', 'Oeu017039.1' => 'oeu', 'Oeu019309.1' => 'oeu', 'Oeu025197.1' => 'oeu', 'Oeu039776.1' => 'oeu', 'Oeu054116.1' => 'oeu', 'Oeu063360.1' => 'oeu', 'Os01g0348600' => 'osa', 'Os01g0796400' => 'osa', 'Os01g0925200' => 'osa', 'Os02g0274100' => 'osa', 'Os02g0654000' => 'osa', 'Os02g0654100' => 'osa', 'Os03g0310400' => 'osa', 'Os05g0155000' => 'osa', 'Os05g0362100' => 'osa', 'Os12g0456000' => 'osa', 'Peaxi162Scf00034g00027' => 'pax', 'Peaxi162Scf00034g00110' => 'pax', 'Peaxi162Scf00034g00115' => 'pax', 'Peaxi162Scf00065g01529' => 'pax', 'Peaxi162Scf00069g01626' => 'pax', 'Peaxi162Scf00128g01626' => 'pax', 'Peaxi162Scf00160g01532' => 'pax', 'Peaxi162Scf00228g00332' => 'pax', 'Peaxi162Scf00231g00330' => 'pax', 'Peaxi162Scf00260g00420' => 'pax', 'Peaxi162Scf00399g00519' => 'pax', 'Peaxi162Scf00646g00322' => 'pax', 'Peaxi162Scf00657g00112' => 'pax', 'Peaxi162Scf01363g00003' => 'pax', 'Peaxi162Scf01759g00004' => 'pax', 'Peaxi162Scf01759g00005' => 'pax', 'Peaxi162Scf03506g00003' => 'pax', 'PGR004G1916' => 'pgr', 'PGR031G0202' => 'pgr', 'PGR031G0697' => 'pgr', 'PGR031G1501' => 'pgr', 'PGR031G3871' => 'pgr', 'PGR119G1868' => 'pgr', 'PGR142G3602' => 'pgr', 'PGSC0003DMG400000376' => 'stu', 'PGSC0003DMG400001206' => 'stu', 'PGSC0003DMG400003906' => 'stu', 'PGSC0003DMG400004630' => 'stu', 'PGSC0003DMG400005498' => 'stu', 'PGSC0003DMG400011314' => 'stu', 'PGSC0003DMG400012409' => 'stu', 'PGSC0003DMG400017930' => 'stu', 'PGSC0003DMG400026228' => 'stu', 'Phvul.003G096400' => 'pvu', 'Phvul.003G096500' => 'pvu', 'Phvul.003G115100' => 'pvu', 'Phvul.003G223810' => 'pvu', 'Phvul.004G164800' => 'pvu', 'Phvul.007G000700' => 'pvu', 'Phvul.011G160900' => 'pvu', 'Potri.001G061000' => 'ptr', 'Potri.001G153300' => 'ptr', 'Potri.001G398600' => 'ptr', 'Potri.003G080800' => 'ptr', 'Potri.003G166700' => 'ptr', 'Potri.008G104500' => 'ptr', 'Potri.008G220400' => 'ptr', 'Potri.010G011900' => 'ptr', 'Potri.010G146400' => 'ptr', 'Potri.018G082900' => 'ptr', 'Pp3c16_17130' => 'ppa', 'Pp3c16_3210' => 'ppa', 'Pp3c1_1870' => 'ppa', 'Pp3c1_580' => 'ppa', 'Pp3c22_7880' => 'ppa', 'Pp3c23_900' => 'ppa', 'Pp3c2_20510' => 'ppa', 'Pp3c5_611' => 'ppa', 'Pp3c7_12670' => 'ppa', 'Pp3c8_12460' => 'ppa', 'Pp3s34_300' => 'ppa', 'Pp3s46_80' => 'ppa', 'PRCOL_00000103' => 'pco', 'PRCOL_00000613' => 'pco', 'PRCOL_00005154' => 'pco', 'PRCOL_00005281' => 'pco', 'PRCOL_00005322' => 'pco', 'Prupe.1G116000' => 'ppe', 'Prupe.1G133000' => 'ppe', 'Prupe.1G220600' => 'ppe', 'Prupe.4G177500' => 'ppe', 'Prupe.5G061300' => 'ppe', 'Prupe.7G233700' => 'ppe', 'Psat0s5275g0040' => 'psa', 'Psat1g043520' => 'psa', 'Psat1g155240' => 'psa', 'Psat4g022760' => 'psa', 'Psat4g025200' => 'psa', 'Psat4g074240' => 'psa', 'Psat4g074280' => 'psa', 'Psat4g174480' => 'psa', 'Psat6g243840' => 'psa', 'Psat7g156320' => 'psa', 'PSO063G1574' => 'pso', 'PSO063G4475' => 'pso', 'PSO063G6040' => 'pso', 'PSO210G4550' => 'pso', 'PSO478G2361' => 'pso', 'PSO541G1666' => 'pso', 'PSO541G5386' => 'pso', 'PSO566G0056' => 'pso', 'PSO566G0198' => 'pso', 'PSO782G0122' => 'pso', 'PSO782G3010' => 'pso', 'PSO782G3736' => 'pso', 'PSO782G4788' => 'pso', 'PSO832G1318' => 'pso', 'QL02p045802' => 'qlo', 'QL03p050823' => 'qlo', 'QL03p050834' => 'qlo', 'QL05p004644' => 'qlo', 'QL06p010066' => 'qlo', 'QL06p012490' => 'qlo', 'QL08p022331' => 'qlo', 'QL12p009265' => 'qlo', 'QL12p009692' => 'qlo', 'QL12p029522' => 'qlo', 'QL12p038629' => 'qlo', 'RcHm_v2.0_Chr2g0090001' => 'rch', 'RcHm_v2.0_Chr4g0423051' => 'rch', 'RcHm_v2.0_Chr4g0425501' => 'rch', 'RcHm_v2.0_Chr4g0425511' => 'rch', 'RcHm_v2.0_Chr4g0429491' => 'rch', 'RcHm_v2.0_Chr5g0032991' => 'rch', 'RcHm_v2.0_Chr6g0255211' => 'rch', 'RcHm_v2.0_Chr7g0204691' => 'rch', 'Rhsim01G0100600' => 'rsi', 'Rhsim02G0007600' => 'rsi', 'Rhsim04G0179900' => 'rsi', 'Rhsim04G0217200' => 'rsi', 'Rhsim04G0224600' => 'rsi', 'Rhsim04G0239600' => 'rsi', 'Rhsim06G0200700' => 'rsi', 'Rhsim06G0201000' => 'rsi', 'Rhsim12G0021800' => 'rsi', 'Rhsim13G0009200' => 'rsi', 'Rhsim13G0117900' => 'rsi', 'Sabra01G0043900' => 'sbr', 'Sabra01G0123100' => 'sbr', 'Sabra02G0156300' => 'sbr', 'Sabra03G0052200' => 'sbr', 'Sabra03G0122000' => 'sbr', 'Sabra08G0152000' => 'sbr', 'Sabra10G0007600' => 'sbr', 'Sabra10G0112700' => 'sbr', 'Sabra16G0261300' => 'sbr', 'Sabra18G0070700' => 'sbr', 'SalBow1G6031' => 'sbo', 'SalBow2G3255' => 'sbo', 'SalBow5G3805' => 'sbo', 'SalBow6G2784' => 'sbo', 'SalBow7G1062' => 'sbo', 'SalBow7G1829' => 'sbo', 'SalBow8G4322' => 'sbo', 'Sc01g0008180' => 'sci', 'Sc08g0007630' => 'sci', 'Sc12g0006910' => 'sci', 'Sc13g0003330' => 'sci', 'Sc16g0007090' => 'sci', 'Sc19g0003060' => 'sci', 'Sed0002501' => 'sed', 'Sed0003962' => 'sed', 'Sed0008053' => 'sed', 'Sed0011666' => 'sed', 'Sed0013117' => 'sed', 'Sed0018147' => 'sed', 'Sed0018626' => 'sed', 'Sed0021300' => 'sed', 'SEGI_09261' => 'sgi', 'SEGI_11140' => 'sgi', 'SEGI_14120' => 'sgi', 'SEGI_23101' => 'sgi', 'SEGI_23233' => 'sgi', 'SEGI_27308' => 'sgi', 'SEGI_30733' => 'sgi', 'SEGI_33494' => 'sgi', 'SEGI_35921' => 'sgi', 'SEGI_40847' => 'sgi', 'SGA_v2.0_scaffold104G30071' => 'sas', 'SGA_v2.0_scaffold198G41137' => 'sas', 'SGA_v2.0_scaffold391G50614' => 'sas', 'SGA_v2.0_scaffold40G15422' => 'sas', 'SGA_v2.0_scaffold48G18016' => 'sas', 'SGA_v2.0_scaffold73G24251' => 'sas', 'SGA_v2.0_scaffold91G28004' => 'sas', 'SHI00127' => 'shi', 'SHI07401' => 'shi', 'SMO119G0356' => 'smo', 'SMO164G0204' => 'smo', 'SMO171G0023' => 'smo', 'SMO174G0042' => 'smo', 'SMO347G0065' => 'smo', 'SMO347G0625' => 'smo', 'SMO356G0411' => 'smo', 'SMO356G0629' => 'smo', 'Solyc01g059830.3' => 'sly', 'Solyc01g066620.4' => 'sly', 'Solyc05g024235.1' => 'sly', 'Solyc06g009160.4' => 'sly', 'Solyc07g019670.4' => 'sly', 'Solyc07g063010.3' => 'sly', 'Solyc08g068390.3' => 'sly', 'Solyc08g078130.4' => 'sly', 'Solyc12g007170.3' => 'sly', 'Solyc12g099440.3' => 'sly', 'Sopen01g025100' => 'spe', 'Sopen01g028270' => 'spe', 'Sopen05g019110' => 'spe', 'Sopen06g003930' => 'spe', 'Sopen07g008470' => 'spe', 'Sopen07g031200' => 'spe', 'Sopen08g022260' => 'spe', 'Sopen08g022270' => 'spe', 'Sopen08g026620' => 'spe', 'Sopen12g003160' => 'spe', 'Sopen12g034110' => 'spe', 'Sp2g08090' => 'spa', 'Sp3g05820' => 'spa', 'Sp3g13490' => 'spa', 'Sp7g14710' => 'spa', 'Sp7g17310' => 'spa', 'Sp7g26950' => 'spa', 'TAR362G0262' => 'tar', 'TAR374G0112' => 'tar', 'TAR375G0271' => 'tar', 'TAR383G0179' => 'tar', 'TAR624G0845' => 'tar', 'TAR626G0277' => 'tar', 'TAR626G1183' => 'tar', 'TAR636G0396' => 'tar', 'THA.LOC104802693' => 'tha', 'THA.LOC104807916' => 'tha', 'THA.LOC104818085' => 'tha', 'THA.LOC104818910' => 'tha', 'THA.LOC104821796' => 'tha', 'Thecc.01G303100' => 'tca', 'Thecc.02G198300' => 'tca', 'Thecc.03G244600' => 'tca', 'Thecc.04G287500' => 'tca', 'Thecc.04G302100' => 'tca', 'Thecc.07G094500' => 'tca', 'Thecc.09G041600' => 'tca', 'Thecc.09G107300' => 'tca', 'Thecc.09G107400' => 'tca', 'Thhalv10003257m.g' => 'esa', 'Thhalv10020152m.g' => 'esa', 'Thhalv10021099m.g' => 'esa', 'Thhalv10024533m.g' => 'esa', 'Thhalv10026021m.g' => 'esa', 'Thhalv10026747m.g' => 'esa', 'TPR.G10042' => 'tpr', 'TPR.G10468' => 'tpr', 'TPR.G25420' => 'tpr', 'TPR.G3181' => 'tpr', 'TPR.G33048' => 'tpr', 'TPR.G36705' => 'tpr', 'TPR.G417' => 'tpr', 'TPR.G8650' => 'tpr', 'TWI09G0777' => 'twi', 'TWI09G1635' => 'twi', 'TWI18G0387' => 'twi', 'TWI23G0592' => 'twi', 'TWI34G1768' => 'twi', 'TWI38G0085' => 'twi', 'TWI63G1679' => 'twi', 'TWI73G1029' => 'twi', 'unitig_0.g2582' => 'ugi', 'unitig_22.g5514' => 'ugi', 'unitig_22.g5515' => 'ugi', 'unitig_32.g11172' => 'ugi', 'unitig_899.g15070' => 'ugi', 'vmacro00030' => 'vma', 'vmacro01035' => 'vma', 'vmacro02440' => 'vma', 'vmacro08038' => 'vma', 'vmacro08174' => 'vma', 'vmacro11880' => 'vma', 'vmacro14177' => 'vma', 'vmacro15218' => 'vma', 'vmacro20718' => 'vma', 'vmacro20719' => 'vma', 'vmacro22310' => 'vma', 'vmacro22311' => 'vma', 'VMungo0464G2167' => 'vmu', 'VMungo0720G0878' => 'vmu', 'VMungo1127G0883' => 'vmu', 'VMungo1215G0310' => 'vmu', 'VMungo1215G2040' => 'vmu', 'VMungo1215G3380' => 'vmu', 'Zm00001eb014890' => 'zma', 'Zm00001eb116970' => 'zma', 'Zm00001eb187100' => 'zma', 'Zm00001eb203470' => 'zma', 'Zm00001eb237380' => 'zma', 'Zm00001eb237390' => 'zma', 'Zm00001eb249240' => 'zma', 'Zm00001eb249250' => 'zma', 'Zm00001eb285730' => 'zma', 'Zm00001eb340720' => 'zma', 'Zm00001eb363960' => 'zma', 'Zm00001eb369580' => 'zma' ) $gf_id = 'HOM05D000549' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000549' ) $data_identifier = 'HOM05D000549' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 25, 'aar' => (int) 6, 'aag' => (int) 7, 'ach' => (int) 19, 'amhyb' => (int) 7, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 23, 'ath' => (int) 6, 'atr' => (int) 7, 'acertr' => (int) 6, 'cqu' => (int) 14, 'bca' => (int) 17, 'bol' => (int) 12, 'bra' => (int) 13, 'can' => (int) 28, 'cansat' => (int) 8, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 10, 'cbr' => (int) 4, 'ccan' => (int) 6, 'cde' => (int) 5, 'cfa' => (int) 16, 'ccl' => (int) 6, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 9, 'cpa' => (int) 7, 'cre' => (int) 5, 'csa' => (int) 13, 'camsi' => (int) 16, 'dca' => (int) 8, 'din' => (int) 9, 'dzi' => (int) 11, 'eca' => (int) 6, 'bvu' => (int) 6, 'egr' => (int) 16, 'fan' => (int) 15, 'fve' => (int) 6, 'gma' => (int) 15, 'ghi' => (int) 26, 'gra' => (int) 15, 'vvi' => (int) 6, 'han' => (int) 17, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 13, 'lonja' => (int) 8, 'lja' => (int) 7, 'lsa' => (int) 23, 'mes' => (int) 7, 'mpo' => (int) 7, 'mbi' => (int) 7, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 11, 'cme' => (int) 7, 'egut' => (int) 8, 'ama' => (int) 7, 'nta' => (int) 19, 'nnu' => (int) 10, 'oeu' => (int) 10, 'osa' => (int) 10, 'pax' => (int) 17, 'pgr' => (int) 7, 'stu' => (int) 9, 'pvu' => (int) 7, 'ptr' => (int) 10, 'ppa' => (int) 12, 'pco' => (int) 5, 'ppe' => (int) 6, 'psa' => (int) 10, 'pso' => (int) 14, 'qlo' => (int) 11, 'rch' => (int) 8, 'rsi' => (int) 11, 'sbr' => (int) 10, 'sbo' => (int) 7, 'sci' => (int) 6, 'sed' => (int) 8, 'sgi' => (int) 10, 'sas' => (int) 7, 'shi' => (int) 2, 'smo' => (int) 8, 'sly' => (int) 10, 'spe' => (int) 11, 'spa' => (int) 6, 'tar' => (int) 8, 'tha' => (int) 5, 'tca' => (int) 9, 'esa' => (int) 6, 'tpr' => (int) 8, 'twi' => (int) 8, 'ugi' => (int) 5, 'vma' => (int) 12, 'vmu' => (int) 6, 'zma' => (int) 12 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb369580' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1